◀ domain architecture  ·  operons  ·  ❔ guide

Sesp_00778

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
3-isopropylmalate dehydrogenase
Gene
leuB
Location
NZ_AP042459.1:872,387–873,463 (−)   358 aa
Keys
gbid 1575324   gene_oid 8099420101  

Domain architecture

Pfam domain
Pfam signature: pfam00180

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

15 proteins across 8 genomes share architecture group #258  pfam00180

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00390 421 pfam00180
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00778 358 pfam00180
Syntrophomonas curvata DSM15682 / GL#14 Scur_00823 421 pfam00180
Syntrophomonas curvata DSM15682 / GL#14 Scur_02522 356 pfam00180
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00378 421 pfam00180
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02424 358 pfam00180
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00894 357 pfam00180
Syntrophomonas wolfei saponavida / SD2 Sws_00567 424 pfam00180
Syntrophomonas wolfei saponavida / SD2 Sws_01561 364 pfam00180
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00417 422 pfam00180
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02558 358 pfam00180
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00368 422 pfam00180
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02175 358 pfam00180
Syntrophomonas zehnderi OL-4 Szehn Szeh_01971 357 pfam00180
Syntrophomonas zehnderi OL-4 Szehn Szeh_02427 423 pfam00180
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