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◀ domain architecture  ·  operons  ·  ❔ guide
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Sesp_01583

smpp Syntrophomonas erecta sporosyntropha Sespor
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
sigma-54 interaction domain-containing protein
Gene
—
Location
NZ_AP042459.1:1,675,232–1,676,884 (−)   550 aa
Keys
gbid 1576116   gene_oid 8099420955  

Domain architecture

Pfam domain
Pfam signature: pfam00989,pfam00158,pfam02954

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 5 genomes share architecture group #1830  pfam00158,pfam00989,pfam02954

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01583 ◀ 550 pfam00989,pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_00459 355 pfam00989,pfam00158,pfam02954
Syntrophomonas curvata DSM15682 / GL#14 Scur_01056 452 pfam00989,pfam00158,pfam02954
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01159 623 pfam00989,pfam00158,pfam02954
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01716 658 pfam00989,pfam00158,pfam02954
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01750 550 pfam00989,pfam00158,pfam02954
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00431 459 pfam00989,pfam00158,pfam02954
Syntrophomonas wolfei saponavida / SD2 Sws_00580 569 pfam00989,pfam00158,pfam02954
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