Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00097

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ribosome maturation factor RimP
Gene
—
Location
NZ_CM161535.1:113,439–113,894 (−)   151 aa
Keys
gbid 1717777   gene_oid 8099421914  

Domain architecture

Pfam domain
Pfam signature: pfam02576,pfam17384

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_00089 Sws_00090 Sws_00091 Sws_00092 Sws_00093 Sws_00094 Sws_00095 Sws_00096 Sws_00097 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #565  pfam02576,pfam17384

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00097 ◀ 151 pfam02576,pfam17384
Syntrophomonas curvata DSM15682 / GL#14 Scur_01256 148 pfam02576,pfam17384
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00985 149 pfam02576,pfam17384
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00975 154 pfam02576,pfam17384
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00895 154 pfam02576,pfam17384
Syntrophomonas zehnderi OL-4 Szehn Szeh_01555 150 pfam02576,pfam17384
↑ Top




v1.00 @copyright 2026 UCLA