Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00573

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
Gene
gatC
Location
NZ_CM161535.1:601,343–601,627 (−)   94 aa
Keys
gbid 1718255   gene_oid 8099422408  

Domain architecture

Pfam domain
Pfam signature: pfam02686

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_00571 Sws_00572 Sws_00573 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #252  pfam02686

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00573 ◀ 94 pfam02686
Syntrophomonas curvata DSM15682 / GL#14 Scur_00817 94 pfam02686
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00372 94 pfam02686
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00396 94 pfam02686
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01351 78 pfam02686
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00411 94 pfam02686
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00362 94 pfam02686
Syntrophomonas zehnderi OL-4 Szehn Szeh_02431 94 pfam02686
↑ Top




v1.00 @copyright 2026 UCLA