Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00747

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
rhomboid family intramembrane serine protease
Gene
—
Location
NZ_CM161535.1:797,823–798,500 (−)   225 aa
Keys
gbid 1718431   gene_oid 8099422600   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01694

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1143  pfam01694

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00747 ◀ 225 TM pfam01694
Syntrophomonas curvata DSM15682 / GL#14 Scur_00547 220 pfam01694
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01761 221 TM pfam01694
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01572 221 TM pfam01694
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00543 220 TM pfam01694
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02468 222 TM pfam01694
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02085 222 TM pfam01694
Syntrophomonas zehnderi OL-4 Szehn Szeh_02720 213 TM pfam01694
↑ Top




v1.00 @copyright 2026 UCLA