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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00543

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
rhomboid family intramembrane serine protease
Gene
—
Location
NZ_BBCE01000003.1:121,072–121,734 (+)   220 aa
Keys
gbid 1777503   gene_oid 2731398929   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01694

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1143  pfam01694

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00543 ◀ 220 TM pfam01694
Syntrophomonas curvata DSM15682 / GL#14 Scur_00547 220 pfam01694
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01761 221 TM pfam01694
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01572 221 TM pfam01694
Syntrophomonas wolfei saponavida / SD2 Sws_00747 225 TM pfam01694
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02468 222 TM pfam01694
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02085 222 TM pfam01694
Syntrophomonas zehnderi OL-4 Szehn Szeh_02720 213 TM pfam01694
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