Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_01955

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
50S ribosomal protein L27
Gene
rpmA
Location
NZ_CM161535.1:2,110,600–2,110,893 (+)   97 aa
Keys
gbid 1719650   gene_oid 8099423904  

Domain architecture

Pfam domain
Pfam signature: pfam01016

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_01953 Sws_01954 Sws_01955 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #959  pfam01016

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_01955 ◀ 97 pfam01016
Syntrophomonas curvata DSM15682 / GL#14 Scur_02112 98 pfam01016
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00263 98 pfam01016
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00508 98 pfam01016
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00075 99 pfam01016
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01809 97 pfam01016
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01641 97 pfam01016
Syntrophomonas zehnderi OL-4 Szehn Szeh_01829 98 pfam01016
↑ Top




v1.00 @copyright 2026 UCLA