Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_02828

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
RNA polymerase sigma factor
Gene
—
Location
NZ_CM161535.1:3,044,066–3,044,599 (+)   177 aa
Keys
gbid 1720525   gene_oid 8099424849  

Domain architecture

Pfam domain
Pfam signature: pfam04542,pfam08281

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_02828 ◀ Sws_02829   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

48 proteins across 8 genomes share architecture group #98  pfam04542,pfam08281

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00644 192 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_00670 170 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_00697 166 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_00959 216 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_01289 189 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_01451 190 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_02503 182 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_02605 207 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_02722 181 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_02828 ◀ 177 pfam04542,pfam08281
Syntrophomonas wolfei saponavida / SD2 Sws_03196 180 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00386 159 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00582 188 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00587 193 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00690 179 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00716 187 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_00769 173 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_01588 198 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_01840 199 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_02155 184 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_02203 190 pfam04542,pfam08281
Syntrophomonas curvata DSM15682 / GL#14 Scur_02732 217 pfam04542,pfam08281
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00645 198 pfam04542,pfam08281
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00752 160 pfam04542,pfam08281
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01745 193 pfam04542,pfam08281
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02014 195 pfam04542,pfam08281
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02292 215 pfam04542,pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00026 160 pfam04542,pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00135 198 pfam04542,pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00914 215 pfam04542,pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01248 195 pfam04542,pfam08281
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01588 193 pfam04542,pfam08281
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00425 182 pfam04542,pfam08281
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00555 193 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01363 192 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01500 187 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02186 180 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02326 193 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02756 216 pfam04542,pfam08281
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02865 185 pfam04542,pfam08281
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00130 193 pfam04542,pfam08281
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01824 189 pfam04542,pfam08281
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02053 193 pfam04542,pfam08281
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02398 216 pfam04542,pfam08281
Syntrophomonas zehnderi OL-4 Szehn Szeh_00271 218 pfam04542,pfam08281
Syntrophomonas zehnderi OL-4 Szehn Szeh_01587 197 pfam04542,pfam08281
Syntrophomonas zehnderi OL-4 Szehn Szeh_02050 151 pfam04542,pfam08281
Syntrophomonas zehnderi OL-4 Szehn Szeh_02266 162 pfam04542,pfam08281
↑ Top




v1.00 @copyright 2026 UCLA