Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01227

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ABC transporter permease
Gene
—
Location
NZ_BBCE01000009.1:16,476–17,213 (−)   245 aa
Keys
gbid 1775604   gene_oid 2731399741   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01061

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_01226 Spalm_01227 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 3 genomes share architecture group #1895  pfam01061

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01227 ◀ 245 TM pfam01061
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01857 263 TM pfam01061
Syntrophomonas curvata DSM15682 / GL#14 Scur_00746 256 pfam01061
Syntrophomonas wolfei saponavida / SD2 Sws_01265 256 TM pfam01061
Syntrophomonas wolfei saponavida / SD2 Sws_02313 240 TM pfam01061
↑ Top




v1.00 @copyright 2026 UCLA