Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_01947

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
outer membrane protein assembly factor BamB family protein
Gene
—
Location
NZ_BBCE01000017.1:37,031–38,191 (+)   386 aa
Keys
gbid 1776126   gene_oid 2731400581  

Domain architecture

Pfam domain
Pfam signature: pfam13360

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_01947 ◀ Spalm_01948 Spalm_01949   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #1016  pfam13360

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01947 ◀ 386 pfam13360
Syntrophomonas curvata DSM15682 / GL#14 Scur_02277 397 SP pfam13360
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01776 407 TM pfam13360
Syntrophomonas zehnderi OL-4 Szehn Szeh_02055 396 SPTM pfam13360
↑ Top




v1.00 @copyright 2026 UCLA