Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00313

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
type 4a pilus biogenesis protein PilO
Gene
pilO
Location
NZ_BBCE01000002.1:72,080–72,781 (+)   233 aa
Keys
gbid 1776853   gene_oid 2731398659   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam04350

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_00311 Spalm_00312 Spalm_00313 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #1940  pfam04350

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00313 ◀ 233 TM pfam04350
Syntrophomonas curvata DSM15682 / GL#14 Scur_00963 255 pfam04350
↑ Top




v1.00 @copyright 2026 UCLA