Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00078

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
Rne/Rng family ribonuclease
Gene
—
Location
NZ_BBCE01000001.1:74,222–75,652 (−)   476 aa
Keys
gbid 1776889   gene_oid 2731398376  

Domain architecture

Pfam domain
Pfam signature: pfam10150

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_00078 ◀ Spalm_00079   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #962  pfam10150

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00078 ◀ 476 pfam10150
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00260 478 pfam10150
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00511 478 pfam10150
Syntrophomonas wolfei saponavida / SD2 Sws_01950 473 pfam10150
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01812 476 pfam10150
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01644 476 pfam10150
Syntrophomonas zehnderi OL-4 Szehn Szeh_01832 474 pfam10150
↑ Top




v1.00 @copyright 2026 UCLA