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◀ domain architecture  ·  operons  ·  ❔ guide
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Spalm_00522

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
non-homologous end-joining DNA ligase
Gene
ligD
Location
NZ_BBCE01000003.1:90,464–91,402 (+)   312 aa
Keys
gbid 1777154   gene_oid 2731398903  

Domain architecture

Pfam domain
Pfam signature: pfam01068,pfam04679

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_00519 Spalm_00520 Spalm_00521 Spalm_00522 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #691  pfam01068,pfam04679

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00522 ◀ 312 pfam01068,pfam04679
Syntrophomonas curvata DSM15682 / GL#14 Scur_00908 308 pfam01068,pfam04679
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00432 308 pfam01068,pfam04679
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01265 309 pfam01068,pfam04679
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01128 309 pfam01068,pfam04679
Syntrophomonas zehnderi OL-4 Szehn Szeh_02631 313 pfam01068,pfam04679
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