Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Spalm_00686

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
translation initiation factor eIF-2B
Gene
—
Location
NZ_BBCE01000004.1:100,207–101,058 (−)   283 aa
Keys
gbid 1777283   gene_oid 2731399101  

Domain architecture

Pfam domain
Pfam signature: pfam01008

Putative operon (same contig + strand, gap ≤ 50 bp)

Spalm_00686 ◀ Spalm_00687   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

9 proteins across 6 genomes share architecture group #488  pfam01008

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00686 ◀ 283 pfam01008
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02358 337 pfam01008
Syntrophomonas curvata DSM15682 / GL#14 Scur_01145 357 pfam01008
Syntrophomonas wolfei saponavida / SD2 Sws_00212 344 pfam01008
Syntrophomonas wolfei saponavida / SD2 Sws_00355 272 pfam01008
Syntrophomonas wolfei saponavida / SD2 Sws_02035 341 pfam01008
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00856 346 TM pfam01008
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00777 346 TM pfam01008
Syntrophomonas zehnderi OL-4 Szehn Szeh_02535 336 pfam01008
↑ Top




v1.00 @copyright 2026 UCLA