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Spalm_00565

smpp Syntrophomonas palmitatica JCM14374 Spalm
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
ABC transporter substrate-binding protein
Gene
Location
NZ_BBCE01000003.1:144,228–145,742 (+)   504 aa
Keys
gbid 1777618   gene_oid 2731398955  

Domain architecture

Pfam domain
Pfam signature: pfam00496

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 7 genomes share architecture group #1126  pfam00496

GenomeLocusaaSP/TMPfam order
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00565 504 pfam00496
Syntrophomonas curvata DSM15682 / GL#14 Scur_00594 550 pfam00496
Syntrophomonas curvata DSM15682 / GL#14 Scur_02458 510 pfam00496
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00759 537 TM pfam00496
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01738 546 TM pfam00496
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00019 537 TM pfam00496
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01595 546 TM pfam00496
Syntrophomonas wolfei saponavida / SD2 Sws_00637 547 TM pfam00496
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02319 545 TM pfam00496
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02046 545 TM pfam00496
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