◀ domain architecture  ·  operons  ·  ❔ guide

Ser_00759

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶

Identity & position

Product
peptide ABC transporter substrate-binding protein
Gene
Location
NZ_CM128632.1:859,200–860,813 (+)   537 aa
Keys
gbid 946109   gene_oid 8030287371   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00496

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

10 proteins across 7 genomes share architecture group #1126  pfam00496

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00759 537 TM pfam00496
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01738 546 TM pfam00496
Syntrophomonas curvata DSM15682 / GL#14 Scur_00594 550 pfam00496
Syntrophomonas curvata DSM15682 / GL#14 Scur_02458 510 pfam00496
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00019 537 TM pfam00496
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01595 546 TM pfam00496
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00565 504 pfam00496
Syntrophomonas wolfei saponavida / SD2 Sws_00637 547 TM pfam00496
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02319 545 TM pfam00496
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02046 545 TM pfam00496
↑ Top





v1.00 @copyright 2026 UCLA