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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_02383

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
RNA polymerase sigma factor RpoD
Gene
rpoD
Location
NZ_CGIH01000044.1:2,438–3,517 (−)   359 aa
Keys
gbid 1783318   gene_oid 2677390309  

Domain architecture

Pfam domain
Pfam signature: pfam03979,pfam00140,pfam04542,pfam04539,pfam04545

Putative operon (same contig + strand, gap ≤ 50 bp)

Szeh_02383 ◀ Szeh_02384   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #898  pfam00140,pfam03979,pfam04539,pfam04542,pfam04545

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_02383 ◀ 359 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas curvata DSM15682 / GL#14 Scur_02011 364 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00328 362 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00442 362 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei saponavida / SD2 Sws_02015 360 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01671 358 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01532 358 pfam03979,pfam00140,pfam04542,pfam04539,pfam04545
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