Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_00121

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
selenocysteine-specific translation elongation factor
Gene
selB
Location
NZ_CGIH01000004.1:8,895–10,799 (+)   634 aa
Keys
gbid 1783532   gene_oid 2677387972  

Domain architecture

Pfam domain
Pfam signature: pfam00009,pfam03144,pfam09106,pfam09107

Putative operon (same contig + strand, gap ≤ 50 bp)

Szeh_00121 ◀ Szeh_00122 Szeh_00123 Szeh_00124   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

2 proteins across 2 genomes share architecture group #1364  pfam00009,pfam03144,pfam09106,pfam09107

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00121 ◀ 634 pfam00009,pfam03144,pfam09106,pfam09107
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02605 631 pfam00009,pfam03144,pfam09106,pfam09107
↑ Top




v1.00 @copyright 2026 UCLA