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◀ domain architecture  ·  operons  ·  ❔ guide
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Szeh_01318

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
SigB/SigF/SigG family RNA polymerase sigma factor
Gene
—
Location
NZ_CGIH01000026.1:77,445–78,182 (+)   245 aa
Keys
gbid 1785058   gene_oid 2677389196  

Domain architecture

Pfam domain
Pfam signature: pfam04542,pfam04539,pfam04545

Putative operon (same contig + strand, gap ≤ 50 bp)

Szeh_01316 Szeh_01317 Szeh_01318 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

16 proteins across 8 genomes share architecture group #391  pfam04539,pfam04542,pfam04545

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01318 ◀ 245 pfam04542,pfam04539,pfam04545
Syntrophomonas curvata DSM15682 / GL#14 Scur_01030 243 pfam04542,pfam04539,pfam04545
Syntrophomonas curvata DSM15682 / GL#14 Scur_01239 257 pfam04542,pfam04539,pfam04545
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01015 257 pfam04542,pfam04539,pfam04545
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01221 243 pfam04542,pfam04539,pfam04545
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02109 243 pfam04542,pfam04539,pfam04545
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02324 257 pfam04542,pfam04539,pfam04545
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00384 216 pfam04542,pfam04539,pfam04545
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01001 257 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei saponavida / SD2 Sws_00114 257 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei saponavida / SD2 Sws_00167 256 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei saponavida / SD2 Sws_00369 244 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00648 243 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00958 261 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00608 243 pfam04542,pfam04539,pfam04545
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00878 260 pfam04542,pfam04539,pfam04545
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