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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_00240

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
peptide chain release factor 2
Gene
prfB
Location
NC_008346.1:280,617–281,654 (+)   368 aa
Keys
gbid 1811984   gene_oid 638137138  

Domain architecture

Pfam domain
Pfam signature: pfam03462,pfam00472

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

13 proteins across 8 genomes share architecture group #170  pfam00472,pfam03462

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00240 ◀ 368 pfam03462,pfam00472
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02443 355 pfam03462,pfam00472
Syntrophomonas curvata DSM15682 / GL#14 Scur_00292 353 pfam03462,pfam00472
Syntrophomonas curvata DSM15682 / GL#14 Scur_02774 355 pfam03462,pfam00472
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02246 355 pfam03462,pfam00472
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00961 355 pfam03462,pfam00472
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00691 355 pfam03462,pfam00472
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00826 348 pfam03462,pfam00472
Syntrophomonas wolfei saponavida / SD2 Sws_01009 355 pfam03462,pfam00472
Syntrophomonas wolfei saponavida / SD2 Sws_01324 347 pfam03462,pfam00472
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02804 355 pfam03462,pfam00472
Syntrophomonas zehnderi OL-4 Szehn Szeh_00226 355 pfam03462,pfam00472
Syntrophomonas zehnderi OL-4 Szehn Szeh_02363 370 pfam03462,pfam00472
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