Gene / Protein

Small Microbes Pathway Profiler

Profiler Search and BLAST

◀ domain architecture · operons · ❔ guide

Sws_01324

smpp Syntrophomonas wolfei saponavida

operons in this genome ▶ · domain architectures ▶ · reaction activity ▶

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Identity & position

Product: peptide chain release factor 2
Gene: prfB
Location: NZ_CM161535.1:1,417,309–1,418,337 (+) 347 aa
Keys: gbid 1813877 gene_oid 8099423222

Domain architecture

Pfam domain

Pfam signature: pfam03462,pfam00472

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_01324 ◀ Sws_01325 → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

13 proteins across 8 genomes share architecture group #170 pfam00472,pfam03462

Genome	Locus	aa	SP/TM	Pfam order
Syntrophomonas wolfei saponavida / SD2	Sws_01009	355		pfam03462,pfam00472
Syntrophomonas wolfei saponavida / SD2	Sws_01324 ◀	347		pfam03462,pfam00472
Syntrophomonas curvata DSM15682 / GL#14	Scur_00292	353		pfam03462,pfam00472
Syntrophomonas curvata DSM15682 / GL#14	Scur_02774	355		pfam03462,pfam00472
Syntrophomonas erecta DSM 16215 / GB-438	Ser_02246	355		pfam03462,pfam00472
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344	Sesp_00961	355		pfam03462,pfam00472
Syntrophomonas palmitatica JCM14374 Spalm	Spalm_00691	355		pfam03462,pfam00472
Syntrophomonas palmitatica JCM14374 Spalm	Spalm_00826	348		pfam03462,pfam00472
Syntrophomonas wolfei methylbutyratica 4J5	Swm_02804	355		pfam03462,pfam00472
Syntrophomonas wolfei subsp. wolfei Goettingen	Swg_00240	368		pfam03462,pfam00472
Syntrophomonas wolfei subsp. wolfei Goettingen	Swg_02443	355		pfam03462,pfam00472
Syntrophomonas zehnderi OL-4 Szehn	Szeh_00226	355		pfam03462,pfam00472
Syntrophomonas zehnderi OL-4 Szehn	Szeh_02363	370		pfam03462,pfam00472

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