Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_00582

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
transcription antitermination factor NusB
Gene
nusB
Location
NZ_CM161534.1:663,617–664,036 (+)   139 aa
Keys
gbid 1812406   gene_oid 8108582680  

Domain architecture

Pfam domain
Pfam signature: pfam01029

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_00580 Swm_00581 Swm_00582 ◀ Swm_00583   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1460  pfam01029

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00582 ◀ 139 pfam01029
Syntrophomonas curvata DSM15682 / GL#14 Scur_00993 133 pfam01029
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01283 132 pfam01029
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02044 132 pfam01029
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00338 131 pfam01029
Syntrophomonas wolfei saponavida / SD2 Sws_00399 140 pfam01029
Syntrophomonas zehnderi OL-4 Szehn Szeh_01279 134 pfam01029
↑ Top




v1.00 @copyright 2026 UCLA