Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_00923

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
50S ribosomal protein L30
Gene
rpmD
Location
NZ_CM161535.1:992,204–992,383 (−)   59 aa
Keys
gbid 1813829   gene_oid 8099422790  

Domain architecture

Pfam domain
Pfam signature: pfam00327

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_00920 Sws_00921 Sws_00922 Sws_00923 ◀ Sws_00924 Sws_00925 Sws_00926 Sws_00927 Sws_00928 Sws_00929 Sws_00930 Sws_00931 Sws_00932 Sws_00933 Sws_00934 Sws_00935 Sws_00936 Sws_00937 Sws_00938 Sws_00939 Sws_00940 Sws_00941   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1247  pfam00327

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_00923 ◀ 59 pfam00327
Syntrophomonas curvata DSM15682 / GL#14 Scur_02696 61 pfam00327
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00876 62 pfam00327
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02329 60 pfam00327
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02720 61 pfam00327
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02362 60 pfam00327
↑ Top




v1.00 @copyright 2026 UCLA