Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Sws_01544

smpp Syntrophomonas wolfei saponavida
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
efflux RND transporter periplasmic adaptor subunit
Gene
—
Location
NZ_CM161535.1:1,660,388–1,661,752 (−)   454 aa
Keys
gbid 1813908   gene_oid 8099423461   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam16576,pfam02321

Putative operon (same contig + strand, gap ≤ 50 bp)

Sws_01541 Sws_01542 Sws_01543 Sws_01544 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 2 genomes share architecture group #2552  pfam02321,pfam16576

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei saponavida / SD2 Sws_01465 328 pfam16576,pfam02321
Syntrophomonas wolfei saponavida / SD2 Sws_01544 ◀ 454 TM pfam16576,pfam02321
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00769 377 pfam16576,pfam02321
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02105 374 TM pfam02321,pfam16576
↑ Top




v1.00 @copyright 2026 UCLA