Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_01409

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase MnmM
Gene
mnmM
Location
NZ_CGIH01000026.1:176,966–177,568 (−)   200 aa
Keys
gbid 1814860   gene_oid 2677389295  

Domain architecture

Pfam domain
Pfam signature: pfam06962

Putative operon (same contig + strand, gap ≤ 50 bp)

Szeh_01408 Szeh_01409 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #1944  pfam06962

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_01409 ◀ 200 pfam06962
Syntrophomonas curvata DSM15682 / GL#14 Scur_01003 194 pfam06962
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01273 179 pfam06962
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02054 179 pfam06962
↑ Top




v1.00 @copyright 2026 UCLA