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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_00010

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
serine--tRNA ligase
Gene
serS
Location
NC_008346.1:12,776–14,059 (+)   427 aa
Keys
gbid 48539   gene_oid 638136901  

Domain architecture

Pfam domain
Pfam signature: pfam02403,pfam00587

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #10  pfam00587,pfam02403

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00010 ◀ 427 pfam02403,pfam00587
Syntrophomonas curvata DSM15682 / GL#14 Scur_00011 425 pfam02403,pfam00587
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02133 424 pfam02403,pfam00587
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01128 424 pfam02403,pfam00587
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01632 425 pfam02403,pfam00587
Syntrophomonas wolfei saponavida / SD2 Sws_01146 424 pfam02403,pfam00587
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00010 427 pfam02403,pfam00587
Syntrophomonas zehnderi OL-4 Szehn Szeh_00819 423 pfam02403,pfam00587
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