Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Szeh_00819

smpp Syntrophomonas zehnderi OL-4 Szehn
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
serine--tRNA ligase
Gene
serS
Location
NZ_CGIH01000012.1:28,727–29,998 (−)   423 aa
Keys
gbid 1784141   gene_oid 2677388696  

Domain architecture

Pfam domain
Pfam signature: pfam02403,pfam00587

Putative operon (same contig + strand, gap ≤ 50 bp)

Szeh_00819 ◀ Szeh_00820 Szeh_00821   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #10  pfam00587,pfam02403

GenomeLocusaaSP/TMPfam order
Syntrophomonas zehnderi OL-4 Szehn Szeh_00819 ◀ 423 pfam02403,pfam00587
Syntrophomonas curvata DSM15682 / GL#14 Scur_00011 425 pfam02403,pfam00587
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02133 424 pfam02403,pfam00587
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01128 424 pfam02403,pfam00587
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01632 425 pfam02403,pfam00587
Syntrophomonas wolfei saponavida / SD2 Sws_01146 424 pfam02403,pfam00587
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00010 427 pfam02403,pfam00587
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00010 427 pfam02403,pfam00587
↑ Top




v1.00 @copyright 2026 UCLA