Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swg_01236

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
dual-specificity RNA methyltransferase RlmN
Gene
rlmN
Location
NC_008346.1:1,418,507–1,419,580 (−)   357 aa
Keys
gbid 53273   gene_oid 638138102  

Domain architecture

Pfam domain
Pfam signature: pfam04055,pfam13394

Putative operon (same contig + strand, gap ≤ 50 bp)

Swg_01236 ◀ Swg_01237   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 2 genomes share architecture group #748  pfam04055,pfam13394

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01236 ◀ 357 pfam04055,pfam13394
Syntrophomonas zehnderi OL-4 Szehn Szeh_00206 447 pfam04055,pfam13394
Syntrophomonas zehnderi OL-4 Szehn Szeh_02583 82 pfam13394,pfam04055
Syntrophomonas zehnderi OL-4 Szehn Szeh_02652 225 pfam13394,pfam04055
↑ Top




v1.00 @copyright 2026 UCLA