Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_01863

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
RadC family protein
Gene
radC
Location
NZ_CM161534.1:2,053,599–2,054,306 (−)   235 aa
Keys
gbid 939078   gene_oid 8108584048  

Domain architecture

Pfam domain
Pfam signature: pfam20582,pfam04002

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_01859 Swm_01860 Swm_01861 Swm_01862 Swm_01863 ◀ Swm_01864 Swm_01865   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #1623  pfam04002,pfam20582

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01863 ◀ 235 pfam20582,pfam04002
Syntrophomonas curvata DSM15682 / GL#14 Scur_02232 222 pfam20582,pfam04002
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00525 228 pfam20582,pfam04002
Syntrophomonas wolfei saponavida / SD2 Sws_01936 228 pfam20582,pfam04002
↑ Top




v1.00 @copyright 2026 UCLA