Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_01871

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
phosphatidylserine decarboxylase family protein
Gene
—
Location
NZ_CM161534.1:2,062,224–2,062,883 (+)   219 aa
Keys
gbid 939086   gene_oid 8108584056   TM×2

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam02666

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_01871 ◀ Swm_01872   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #977  pfam02666

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01871 ◀ 219 TM pfam02666
Syntrophomonas curvata DSM15682 / GL#14 Scur_01534 213 pfam02666
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01824 213 TM pfam02666
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01680 234 TM pfam02666
Syntrophomonas zehnderi OL-4 Szehn Szeh_01184 214 TM pfam02666
↑ Top




v1.00 @copyright 2026 UCLA