Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_02378

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ABC transporter permease subunit
Gene
—
Location
NZ_CM161534.1:2,621,638–2,622,882 (+)   414 aa
Keys
gbid 939597   gene_oid 8108584604   TM×6

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam12679

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_02377 Swm_02378 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

17 proteins across 8 genomes share architecture group #1008  pfam12679

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01447 262 TM pfam12679
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01949 309 TM pfam12679
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02378 ◀ 414 TM pfam12679
Syntrophomonas curvata DSM15682 / GL#14 Scur_02224 312 pfam12679
Syntrophomonas curvata DSM15682 / GL#14 Scur_02555 336 pfam12679
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02368 262 TM pfam12679
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00836 262 TM pfam12679
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00428 201 TM pfam12679
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01747 368 TM pfam12679
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02030 163 TM pfam12679
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02031 264 TM pfam12679
Syntrophomonas wolfei saponavida / SD2 Sws_00694 414 TM pfam12679
Syntrophomonas wolfei saponavida / SD2 Sws_03086 255 TM pfam12679
Syntrophomonas wolfei saponavida / SD2 Sws_03107 358 TM pfam12679
Syntrophomonas wolfei saponavida / SD2 Sws_03108 365 TM pfam12679
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01754 309 TM pfam12679
Syntrophomonas zehnderi OL-4 Szehn Szeh_01093 262 TM pfam12679
↑ Top




v1.00 @copyright 2026 UCLA