Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_02842

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
MetQ/NlpA family ABC transporter substrate-binding protein
Gene
—
Location
NZ_CM161534.1:3,108,653–3,109,498 (+)   281 aa
Keys
gbid 940062   gene_oid 8108585096   SignalP TM×1

Domain architecture

Pfam domain ▏signal peptide ▮ TM helix
Pfam signature: pfam03180

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_02840 Swm_02841 Swm_02842 ◀ Swm_02843   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1324  pfam03180

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02842 ◀ 281 SPTM pfam03180
Syntrophomonas curvata DSM15682 / GL#14 Scur_01596 276 SP pfam03180
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00621 273 SP pfam03180
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00148 273 SP pfam03180
Syntrophomonas wolfei saponavida / SD2 Sws_01850 276 SP pfam03180
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02477 278 SPTM pfam03180
↑ Top




v1.00 @copyright 2026 UCLA