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◀ domain architecture  ·  operons  ·  ❔ guide
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Swm_02882

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
Gene
—
Location
NZ_CM161534.1:3,147,104–3,147,583 (−)   159 aa
Keys
gbid 940102   gene_oid 8108585137  

Domain architecture

Pfam domain
Pfam signature: pfam02590

Putative operon (same contig + strand, gap ≤ 50 bp)

Monocistronic at this threshold — no co-oriented neighbour within 50 bp. try gap = 300 bp

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1335  pfam02590

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02882 ◀ 159 pfam02590
Syntrophomonas curvata DSM15682 / GL#14 Scur_02841 159 pfam02590
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02196 160 pfam02590
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01015 160 pfam02590
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00627 159 pfam02590
Syntrophomonas wolfei saponavida / SD2 Sws_01042 159 pfam02590
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02513 159 pfam02590
Syntrophomonas zehnderi OL-4 Szehn Szeh_00159 174 pfam02590
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