Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Swm_02917

smpp Syntrophomonas wolfei methylbutyratica 4J5
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
30S ribosomal protein S6
Gene
rpsF
Location
NZ_CM161534.1:3,190,640–3,190,933 (−)   97 aa
Keys
gbid 940136   gene_oid 8108585174  

Domain architecture

Pfam domain
Pfam signature: pfam01250

Putative operon (same contig + strand, gap ≤ 50 bp)

Swm_02915 Swm_02916 Swm_02917 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1357  pfam01250

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02917 ◀ 97 pfam01250
Syntrophomonas curvata DSM15682 / GL#14 Scur_02884 97 pfam01250
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02181 97 pfam01250
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01080 97 pfam01250
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01681 97 pfam01250
Syntrophomonas wolfei saponavida / SD2 Sws_01075 97 pfam01250
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02583 97 pfam01250
Syntrophomonas zehnderi OL-4 Szehn Szeh_00142 97 pfam01250
↑ Top




v1.00 @copyright 2026 UCLA