Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00119

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
metal ABC transporter permease
Gene
—
Location
NZ_CM128632.1:140,677–141,525 (+)   282 aa
Keys
gbid 945459   gene_oid 8030286674   TM×7

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00950

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00116 Ser_00117 Ser_00118 Ser_00119 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 7 genomes share architecture group #1078  pfam00950

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00119 ◀ 282 TM pfam00950
Syntrophomonas curvata DSM15682 / GL#14 Scur_02399 263 pfam00950
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00651 282 TM pfam00950
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01410 265 TM pfam00950
Syntrophomonas wolfei saponavida / SD2 Sws_01415 276 TM pfam00950
Syntrophomonas wolfei saponavida / SD2 Sws_02885 279 TM pfam00950
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01922 266 TM pfam00950
Syntrophomonas zehnderi OL-4 Szehn Szeh_00873 279 TM pfam00950
↑ Top




v1.00 @copyright 2026 UCLA