Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00239

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
valine--tRNA ligase
Gene
—
Location
NZ_CM128632.1:257,077–259,716 (+)   879 aa
Keys
gbid 945581   gene_oid 8030286808  

Domain architecture

Pfam domain
Pfam signature: pfam00133,pfam08264,pfam10458

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00239 ◀ Ser_00240   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #976  pfam00133,pfam08264,pfam10458

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00239 ◀ 879 pfam00133,pfam08264,pfam10458
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00532 879 pfam00133,pfam08264,pfam10458
Syntrophomonas wolfei saponavida / SD2 Sws_01929 881 pfam00133,pfam08264,pfam10458
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01870 883 pfam00133,pfam08264,pfam10458
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01679 883 pfam00133,pfam08264,pfam10458
Syntrophomonas zehnderi OL-4 Szehn Szeh_01857 881 pfam00133,pfam08264,pfam10458
↑ Top




v1.00 @copyright 2026 UCLA