Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00250

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
penicillin-binding protein 2
Gene
—
Location
NZ_CM128632.1:267,615–269,678 (+)   687 aa
Keys
gbid 945592   gene_oid 8030286819   TM×1

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam03717,pfam00905

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00247 Ser_00248 Ser_00249 Ser_00250 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

16 proteins across 8 genomes share architecture group #324  pfam00905,pfam03717

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00250 ◀ 687 TM pfam03717,pfam00905
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00455 576 TM pfam03717,pfam00905
Syntrophomonas curvata DSM15682 / GL#14 Scur_00935 582 pfam03717,pfam00905
Syntrophomonas curvata DSM15682 / GL#14 Scur_02228 702 pfam03717,pfam00905
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00313 576 TM pfam03717,pfam00905
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00521 687 TM pfam03717,pfam00905
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00091 435 pfam03717,pfam00905
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01436 572 TM pfam03717,pfam00905
Syntrophomonas wolfei saponavida / SD2 Sws_00492 569 TM pfam03717,pfam00905
Syntrophomonas wolfei saponavida / SD2 Sws_01940 690 TM pfam03717,pfam00905
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00491 568 TM pfam03717,pfam00905
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01859 702 TM pfam03717,pfam00905
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00479 568 TM pfam03717,pfam00905
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01668 703 TM pfam03717,pfam00905
Syntrophomonas zehnderi OL-4 Szehn Szeh_00656 565 TM pfam03717,pfam00905
Syntrophomonas zehnderi OL-4 Szehn Szeh_01846 694 TM pfam03717,pfam00905
↑ Top




v1.00 @copyright 2026 UCLA