Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00280

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
cobalt transporter CbiM
Gene
cbiM
Location
NZ_CM128632.1:300,002–300,715 (+)   237 aa
Keys
gbid 945622   gene_oid 8030286852   TM×5

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam01891

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00280 ◀ Ser_00281 Ser_00282 Ser_00283   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 6 genomes share architecture group #1528  pfam01891

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00280 ◀ 237 TM pfam01891
Syntrophomonas curvata DSM15682 / GL#14 Scur_01800 239 pfam01891
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00491 237 TM pfam01891
Syntrophomonas wolfei saponavida / SD2 Sws_00797 230 TM pfam01891
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01177 238 TM pfam01891
Syntrophomonas zehnderi OL-4 Szehn Szeh_00882 240 TM pfam01891
Syntrophomonas zehnderi OL-4 Szehn Szeh_02278 232 TM pfam01891
↑ Top




v1.00 @copyright 2026 UCLA