Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00341

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
NADH-quinone oxidoreductase subunit J family protein
Gene
—
Location
NZ_CM128632.1:364,988–365,497 (+)   169 aa
Keys
gbid 945686   gene_oid 8030286921   TM×5

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam00499

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00339 Ser_00340 Ser_00341 ◀ Ser_00342 Ser_00343 Ser_00344 Ser_00345   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #2020  pfam00499

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00341 ◀ 169 TM pfam00499
Syntrophomonas curvata DSM15682 / GL#14 Scur_01495 168 pfam00499
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00429 169 TM pfam00499
Syntrophomonas wolfei saponavida / SD2 Sws_01754 169 TM pfam00499
Syntrophomonas zehnderi OL-4 Szehn Szeh_00911 169 TM pfam00499
↑ Top




v1.00 @copyright 2026 UCLA