Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00400

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
type I-C CRISPR-associated protein Cas5c
Gene
cas5c
Location
NZ_CM128632.1:444,169–444,831 (+)   220 aa
Keys
gbid 945747   gene_oid 8030286989  

Domain architecture

Pfam domain
Pfam signature: pfam09704

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00399 Ser_00400 ◀ Ser_00401 Ser_00402 Ser_00403 Ser_00404   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

11 proteins across 8 genomes share architecture group #316  pfam09704

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00400 ◀ 220 pfam09704
Syntrophomonas curvata DSM15682 / GL#14 Scur_01681 230 pfam09704
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00368 220 pfam09704
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01489 180 pfam09704
Syntrophomonas wolfei saponavida / SD2 Sws_02185 230 pfam09704
Syntrophomonas wolfei methylbutyratica 4J5 Swm_01157 247 pfam09704
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02081 246 pfam09704
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_00466 220 pfam09704
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_01838 246 pfam09704
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02564 241 pfam09704
Syntrophomonas zehnderi OL-4 Szehn Szeh_01709 244 pfam09704
↑ Top




v1.00 @copyright 2026 UCLA