Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00655

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
Fe-S cluster assembly scaffold protein NifU
Gene
nifU
Location
NZ_CM128632.1:747,831–748,271 (+)   146 aa
Keys
gbid 946004   gene_oid 8030287264  

Domain architecture

Pfam domain
Pfam signature: pfam01592

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00654 Ser_00655 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 4 genomes share architecture group #2260  pfam01592

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00655 ◀ 146 pfam01592
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00125 146 pfam01592
Syntrophomonas wolfei saponavida / SD2 Sws_02990 126 pfam01592
Syntrophomonas zehnderi OL-4 Szehn Szeh_01389 128 pfam01592
↑ Top




v1.00 @copyright 2026 UCLA