Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_00880

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
cytochrome c biogenesis protein ResB
Gene
—
Location
NZ_CM128632.1:988,270–989,256 (+)   328 aa
Keys
gbid 946234   gene_oid 8030287501   TM×4

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam05140

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_00879 Ser_00880 ◀ Ser_00881   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

4 proteins across 3 genomes share architecture group #1922  pfam05140

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_00880 ◀ 328 TM pfam05140
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02006 378 TM pfam05140
Syntrophomonas curvata DSM15682 / GL#14 Scur_00848 325 pfam05140
Syntrophomonas wolfei saponavida / SD2 Sws_01873 347 TM pfam05140
↑ Top




v1.00 @copyright 2026 UCLA