Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_01064

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
small basic family protein
Gene
—
Location
NZ_CM128632.1:1,192,054–1,192,389 (−)   111 aa
Keys
gbid 946423   gene_oid 8030287695   TM×4

Domain architecture

Pfam domain ▮ TM helix
Pfam signature: pfam06947

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_01064 ◀ Ser_01065 Ser_01066   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1499  pfam06947

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01064 ◀ 111 TM pfam06947
Syntrophomonas curvata DSM15682 / GL#14 Scur_01190 111 pfam06947
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02272 111 TM pfam06947
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01058 111 TM pfam06947
Syntrophomonas wolfei saponavida / SD2 Sws_00172 111 TM pfam06947
Syntrophomonas wolfei methylbutyratica 4J5 Swm_00910 111 TM pfam06947
Syntrophomonas zehnderi OL-4 Szehn Szeh_01488 111 TM pfam06947
↑ Top




v1.00 @copyright 2026 UCLA