Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_01288

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
acetyl-CoA carboxylase biotin carboxyl carrier protein
Gene
accB
Location
NZ_CM128632.1:1,434,956–1,436,854 (−)   632 aa
Keys
gbid 946650   gene_oid 8030287932  

Domain architecture

Pfam domain
Pfam signature: pfam00682,pfam02436,pfam00364

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_01287 Ser_01288 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #1943  pfam00364,pfam00682,pfam02436

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_01288 ◀ 632 pfam00682,pfam02436,pfam00364
Syntrophomonas curvata DSM15682 / GL#14 Scur_00988 632 pfam00682,pfam02436,pfam00364
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_02039 632 pfam00682,pfam02436,pfam00364
Syntrophomonas wolfei saponavida / SD2 Sws_00404 634 pfam00682,pfam02436,pfam00364
Syntrophomonas zehnderi OL-4 Szehn Szeh_01274 630 pfam00682,pfam02436,pfam00364
↑ Top




v1.00 @copyright 2026 UCLA