Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02145

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ribonuclease P protein component
Gene
rnpA
Location
NZ_CM128632.1:2,359,821–2,360,156 (+)   111 aa
Keys
gbid 947505   gene_oid 8030288840  

Domain architecture

Pfam domain
Pfam signature: pfam00825

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02145 ◀ Ser_02146   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1372  pfam00825

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02145 ◀ 111 pfam00825
Syntrophomonas curvata DSM15682 / GL#14 Scur_02925 111 pfam00825
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_01116 111 pfam00825
Syntrophomonas palmitatica JCM14374 Spalm Spalm_01644 111 pfam00825
Syntrophomonas wolfei saponavida / SD2 Sws_01135 111 pfam00825
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02953 119 pfam00825
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02621 119 pfam00825
Syntrophomonas zehnderi OL-4 Szehn Szeh_00831 111 pfam00825
↑ Top




v1.00 @copyright 2026 UCLA