Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02251

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
ribose 5-phosphate isomerase B
Gene
rpiB
Location
NZ_CM128632.1:2,471,517–2,471,969 (+)   150 aa
Keys
gbid 947610   gene_oid 8030288949  

Domain architecture

Pfam domain
Pfam signature: pfam02502

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02245 Ser_02246 Ser_02247 Ser_02248 Ser_02249 Ser_02250 Ser_02251 ◀ Ser_02252 Ser_02253   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

5 proteins across 5 genomes share architecture group #2394  pfam02502

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02251 ◀ 150 pfam02502
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00956 150 pfam02502
Syntrophomonas palmitatica JCM14374 Spalm Spalm_00697 150 pfam02502
Syntrophomonas wolfei saponavida / SD2 Sws_01004 150 pfam02502
Syntrophomonas zehnderi OL-4 Szehn Szeh_00231 151 pfam02502
↑ Top




v1.00 @copyright 2026 UCLA