Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02278

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
DNA repair protein RadA
Gene
radA
Location
NZ_CM128632.1:2,495,381–2,496,739 (+)   452 aa
Keys
gbid 947637   gene_oid 8030288976  

Domain architecture

Pfam domain
Pfam signature: pfam18073,pfam13481,pfam13541

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02278 ◀ Ser_02279   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1284  pfam13481,pfam13541,pfam18073

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02278 ◀ 452 pfam18073,pfam13481,pfam13541
Syntrophomonas curvata DSM15682 / GL#14 Scur_02744 451 pfam18073,pfam13481,pfam13541
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00929 452 pfam18073,pfam13481,pfam13541
Syntrophomonas wolfei saponavida / SD2 Sws_00976 448 pfam18073,pfam13481,pfam13541
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02773 451 pfam18073,pfam13481,pfam13541
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02412 451 pfam18073,pfam13481,pfam13541
Syntrophomonas zehnderi OL-4 Szehn Szeh_00259 451 pfam18073,pfam13481,pfam13541
↑ Top




v1.00 @copyright 2026 UCLA