Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02310

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
30S ribosomal protein S10
Gene
rpsJ
Location
NZ_CM128632.1:2,527,776–2,528,087 (+)   103 aa
Keys
gbid 947667   gene_oid 8030289017  

Domain architecture

Pfam domain
Pfam signature: pfam00338

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02304 Ser_02305 Ser_02306 Ser_02307 Ser_02308 Ser_02309 Ser_02310 ◀   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

6 proteins across 6 genomes share architecture group #1264  pfam00338

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02310 ◀ 103 pfam00338
Syntrophomonas curvata DSM15682 / GL#14 Scur_02715 103 pfam00338
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00895 103 pfam00338
Syntrophomonas wolfei saponavida / SD2 Sws_00942 103 pfam00338
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02739 103 pfam00338
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02381 103 pfam00338
↑ Top




v1.00 @copyright 2026 UCLA