Small Microbes Pathway Profiler

Domain Counts
Profiler Search and BLAST
CAZy ▾
CAZyme Browser CAzy - DBCAN (original) CAZyme protein counts Proteome Coverage Summary
Search ▾
Text search Domain display search
Pathways ▾
Nitrogen Fixation CANT-Hyd
UMAP
◀ domain architecture  ·  operons  ·  ❔ guide
enter a locus id, or use ?gbid= / ?gene_oid=

Ser_02313

smpp Syntrophomonas erecta DSM 16215
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
✕

Identity & position

Product
50S ribosomal protein L23
Gene
rplW
Location
NZ_CM128632.1:2,529,511–2,529,798 (+)   95 aa
Keys
gbid 947670   gene_oid 8030289020  

Domain architecture

Pfam domain
Pfam signature: pfam00276

Putative operon (same contig + strand, gap ≤ 50 bp)

Ser_02311 Ser_02312 Ser_02313 ◀ Ser_02314 Ser_02315 Ser_02316 Ser_02317 Ser_02318 Ser_02319 Ser_02320 Ser_02321 Ser_02322 Ser_02323 Ser_02324 Ser_02325 Ser_02326 Ser_02327 Ser_02328 Ser_02329 Ser_02330 Ser_02331 Ser_02332 Ser_02333 Ser_02334 Ser_02335 Ser_02336 Ser_02337 Ser_02338 Ser_02339 Ser_02340 Ser_02341 Ser_02342 Ser_02343 Ser_02344   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

8 proteins across 8 genomes share architecture group #1262  pfam00276

GenomeLocusaaSP/TMPfam order
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02313 ◀ 95 pfam00276
Syntrophomonas curvata DSM15682 / GL#14 Scur_02712 95 pfam00276
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00892 95 pfam00276
Syntrophomonas palmitatica JCM14374 Spalm Spalm_02316 95 pfam00276
Syntrophomonas wolfei saponavida / SD2 Sws_00939 95 pfam00276
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02736 95 pfam00276
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02378 95 pfam00276
Syntrophomonas zehnderi OL-4 Szehn Szeh_01070 95 pfam00276
↑ Top




v1.00 @copyright 2026 UCLA