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◀ domain architecture  ·  operons  ·  ❔ guide
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Swg_02388

smpp Syntrophomonas wolfei subsp. wolfei Goettingen
operons in this genome ▶  ·  domain architectures ▶  ·  reaction activity ▶
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Identity & position

Product
DNA-directed RNA polymerase subunit beta
Gene
rpoB
Location
NC_008346.1:2,673,923–2,677,246 (−)   1107 aa
Keys
gbid 58137   gene_oid 638139222  

Domain architecture

Pfam domain
Pfam signature: pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560

Putative operon (same contig + strand, gap ≤ 300 bp)

Swg_02344 Swg_02345 Swg_02346 Swg_02347 Swg_02348 Swg_02349 Swg_02350 Swg_02351 Swg_02352 Swg_02353 Swg_02354 Swg_02355 Swg_02356 Swg_02357 Swg_02358 Swg_02359 Swg_02360 Swg_02361 Swg_02362 Swg_02363 Swg_02364 Swg_02365 Swg_02366 Swg_02367 Swg_02368 Swg_02369 Swg_02370 Swg_02371 Swg_02372 Swg_02373 Swg_02374 Swg_02375 Swg_02376 Swg_02377 Swg_02378 Swg_02379 Swg_02380 Swg_02381 Swg_02382 Swg_02383 Swg_02384 Swg_02385 Swg_02386 Swg_02387 Swg_02388 ◀ Swg_02389 Swg_02390 Swg_02391 Swg_02392 Swg_02393 Swg_02394 Swg_02395 Swg_02396 Swg_02397   → reaction activity for this operon

Same architecture across genomes — proteins sharing this exact Pfam-domain signature

7 proteins across 7 genomes share architecture group #1269  pfam00562,pfam04560,pfam04561,pfam04563,pfam04565,pfam10385

GenomeLocusaaSP/TMPfam order
Syntrophomonas wolfei subsp. wolfei Goettingen Swg_02388 ◀ 1107 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas curvata DSM15682 / GL#14 Scur_02722 1122 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas erecta DSM 16215 / GB-438 Ser_02302 1125 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas erecta sporosyntropha Sespor / JCM 13344 Sesp_00903 1125 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas wolfei saponavida / SD2 Sws_00949 1153 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas wolfei methylbutyratica 4J5 Swm_02746 1109 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
Syntrophomonas zehnderi OL-4 Szehn Szeh_01080 1139 pfam04563,pfam04561,pfam04565,pfam10385,pfam00562,pfam04560
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